Systems Biology

  1. Probing the Dynamic Structure–Function and Structure-Free Energy Relationships of the Coronavirus Main Protease with Biodynamics Theory

    1. Hongbin Wan
    2. Vibhas Aravamuthan
    3. Robert A. Pearlstein

    Reviewed by ScreenIT

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  2. A Workflow of Integrated Resources to Catalyze Network Pharmacology Driven COVID-19 Research

    1. Gergely Zahoránszky-Kőhalmi
    2. Vishal B. Siramshetty
    3. Praveen Kumar
    4. Manideep Gurumurthy
    5. Busola Grillo
    6. Biju Mathew
    7. Dimitrios Metaxatos
    8. Mark Backus
    9. Tim Mierzwa
    10. Reid Simon
    11. Ivan Grishagin
    12. Laura Brovold
    13. Ewy A. Mathé
    14. Matthew D. Hall
    15. Samuel G. Michael
    16. Alexander G. Godfrey
    17. Jordi Mestres
    18. Lars J. Jensen
    19. Tudor I. Oprea

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  3. The Coronavirus Network Explorer: mining a large-scale knowledge graph for effects of SARS-CoV-2 on host cell function

    1. Andreas Krämer
    2. Jean-Noël Billaud
    3. Stuart Tugendreich
    4. Dan Shiffman
    5. Martin Jones
    6. Jeff Green

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  4. COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms

    1. Marek Ostaszewski
    2. Anna Niarakis
    3. Alexander Mazein
    4. Inna Kuperstein
    5. Robert Phair
    6. Aurelio Orta‐Resendiz
    7. Vidisha Singh
    8. Sara Sadat Aghamiri
    9. Marcio Luis Acencio
    10. Enrico Glaab
    11. Andreas Ruepp
    12. Gisela Fobo
    13. Corinna Montrone
    14. Barbara Brauner
    15. Goar Frishman
    16. Luis Cristóbal Monraz Gómez
    17. Julia Somers
    18. Matti Hoch
    19. Shailendra Kumar Gupta
    20. Julia Scheel
    21. Hanna Borlinghaus
    22. Tobias Czauderna
    23. Falk Schreiber
    24. Arnau Montagud
    25. Miguel Ponce de Leon
    26. Akira Funahashi
    27. Yusuke Hiki
    28. Noriko Hiroi
    29. Takahiro G Yamada
    30. Andreas Dräger
    31. Alina Renz
    32. Muhammad Naveez
    33. Zsolt Bocskei
    34. Francesco Messina
    35. Daniela Börnigen
    36. Liam Fergusson
    37. Marta Conti
    38. Marius Rameil
    39. Vanessa Nakonecnij
    40. Jakob Vanhoefer
    41. Leonard Schmiester
    42. Muying Wang
    43. Emily E Ackerman
    44. Jason E Shoemaker
    45. Jeremy Zucker
    46. Kristie Oxford
    47. Jeremy Teuton
    48. Ebru Kocakaya
    49. Gökçe Yağmur Summak
    50. Kristina Hanspers
    51. Martina Kutmon
    52. Susan Coort
    53. Lars Eijssen
    54. Friederike Ehrhart
    55. Devasahayam Arokia Balaya Rex
    56. Denise Slenter
    57. Marvin Martens
    58. Nhung Pham
    59. Robin Haw
    60. Bijay Jassal
    61. Lisa Matthews
    62. Marija Orlic‐Milacic
    63. Andrea Senff-Ribeiro
    64. Karen Rothfels
    65. Veronica Shamovsky
    66. Ralf Stephan
    67. Cristoffer Sevilla
    68. Thawfeek Varusai
    69. Jean‐Marie Ravel
    70. Rupsha Fraser
    71. Vera Ortseifen
    72. Silvia Marchesi
    73. Piotr Gawron
    74. Ewa Smula
    75. Laurent Heirendt
    76. Venkata Satagopam
    77. Guanming Wu
    78. Anders Riutta
    79. Martin Golebiewski
    80. Stuart Owen
    81. Carole Goble
    82. Xiaoming Hu
    83. Rupert W Overall
    84. Dieter Maier
    85. Angela Bauch
    86. Benjamin M Gyori
    87. John A Bachman
    88. Carlos Vega
    89. Valentin Grouès
    90. Miguel Vazquez
    91. Pablo Porras
    92. Luana Licata
    93. Marta Iannuccelli
    94. Francesca Sacco
    95. Anastasia Nesterova
    96. Anton Yuryev
    97. Anita de Waard
    98. Denes Turei
    99. Augustin Luna
    100. Ozgun Babur
    101. Sylvain Soliman
    102. Alberto Valdeolivas
    103. Marina Esteban‐Medina
    104. Maria Peña‐Chilet
    105. Kinza Rian
    106. Tomáš Helikar
    107. Bhanwar Lal Puniya
    108. Dezso Modos
    109. Agatha Treveil
    110. Marton Olbei
    111. Bertrand De Meulder
    112. Stephane Ballereau
    113. Aurélien Dugourd
    114. Aurélien Naldi
    115. Vincent Noël
    116. Laurence Calzone
    117. Chris Sander
    118. Emek Demir
    119. Tamas Korcsmaros
    120. Tom C Freeman
    121. Franck Augé
    122. Jacques S Beckmann
    123. Jan Hasenauer
    124. Olaf Wolkenhauer
    125. Egon L Willighagen
    126. Alexander R Pico
    127. Chris T Evelo
    128. Marc E Gillespie
    129. Lincoln D Stein
    130. Henning Hermjakob
    131. Peter D'Eustachio
    132. Julio Saez‐Rodriguez
    133. Joaquin Dopazo
    134. Alfonso Valencia
    135. Hiroaki Kitano
    136. Emmanuel Barillot
    137. Charles Auffray
    138. Rudi Balling
    139. Reinhard Schneider
    140. the COVID‐19 Disease Map Community

    Reviewed by ScreenIT

    2 evaluationsAppears in 1 listLatest version Latest activity

  5. A 3D structural SARS-CoV-2–human interactome to explore genetic and drug perturbations

    1. Shayne D. Wierbowski
    2. Siqi Liang
    3. Yuan Liu
    4. You Chen
    5. Shagun Gupta
    6. Nicole M. Andre
    7. Steven M. Lipkin
    8. Gary R. Whittaker
    9. Haiyuan Yu

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  6. Genome Scale-Differential Flux Analysis reveals deregulation of lung cell metabolism on SARS-CoV-2 infection

    1. Piyush Nanda
    2. Amit Ghosh

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  7. Scalable workflow for characterization of cell-cell communication in COVID-19 patients

    1. Yingxin Lin
    2. Lipin Loo
    3. Andy Tran
    4. David M. Lin
    5. Cesar Moreno
    6. Daniel Hesselson
    7. G. Gregory Neely
    8. Jean Y. H. Yang

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  8. Tissue Level Profiling of SARS-CoV-2 antivirals in mice to predict their effects: comparing Remdesivir’s active metabolite GS-441 524 vs. the clinically failed Hydroxychloroquine

    1. Oliver Scherf-Clavel
    2. Edith Kaczmarek
    3. Martina Kinzig
    4. Bettina Friedl
    5. Malte Feja
    6. Rainer Höhl
    7. Roland Nau
    8. Ulrike Holzgrabe
    9. Manuela Gernert
    10. Franziska Richter
    11. Fritz Sörgel

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  9. A SARS-CoV-2 – host proximity interactome

    1. Payman Samavarchi-Tehrani
    2. Hala Abdouni
    3. James D.R. Knight
    4. Audrey Astori
    5. Reuben Samson
    6. Zhen-Yuan Lin
    7. Dae-Kyum Kim
    8. Jennifer J. Knapp
    9. Jonathan St-Germain
    10. Christopher D. Go
    11. Brett Larsen
    12. Cassandra J. Wong
    13. Patricia Cassonnet
    14. Caroline Demeret
    15. Yves Jacob
    16. Frederick P. Roth
    17. Brian Raught
    18. Anne-Claude Gingras

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  10. Clade GR and clade GH isolates of SARS-CoV-2 in Asia show highest amount of SNPs

    1. Antara Sengupta
    2. Sk. Sarif Hassan
    3. Pabitra Pal Choudhury

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity
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