Genomics

  1. Oligonucleotide capture sequencing of the SARS-CoV-2 genome and subgenomic fragments from COVID-19 individuals

    1. Harsha Doddapaneni
    2. Sara Javornik Cregeen
    3. Richard Sucgang
    4. Qingchang Meng
    5. Xiang Qin
    6. Vasanthi Avadhanula
    7. Hsu Chao
    8. Vipin Menon
    9. Erin Nicholson
    10. David Henke
    11. Felipe-Andres Piedra
    12. Anubama Rajan
    13. Zeineen Momin
    14. Kavya Kottapalli
    15. Kristi L. Hoffman
    16. Fritz J. Sedlazeck
    17. Ginger Metcalf
    18. Pedro A. Piedra
    19. Donna M. Muzny
    20. Joseph F. Petrosino
    21. Richard A. Gibbs

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  2. Comparative analysis of human coronaviruses focusing on nucleotide variability and synonymous codon usage patterns

    1. Jayanta Kumar Das
    2. Swarup Roy

    Reviewed by ScreenIT

    4 evaluationsAppears in 1 listLatest version Latest activity

  3. SNPnexus COVID: Facilitating the analysis of COVID-19 host genetics

    1. Jorge Oscanoa
    2. Lavanya Sivapalan
    3. Maryam Abdollahyan
    4. Emanuela Gadaleta
    5. Claude Chelala

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  4. Recommendations for accurate genotyping of SARS-CoV-2 using amplicon-based sequencing of clinical samples

    1. Slawomir Kubik
    2. Ana Claudia Marques
    3. Xiaobin Xing
    4. Janine Silvery
    5. Claire Bertelli
    6. Flavio De Maio
    7. Spyros Pournaras
    8. Tom Burr
    9. Yannis Duffourd
    10. Helena Siemens
    11. Chakib Alloui
    12. Lin Song
    13. Yvan Wenger
    14. Alexandra Saitta
    15. Morgane Macheret
    16. Ewan W. Smith
    17. Philippe Menu
    18. Marion Brayer
    19. Lars M. Steinmetz
    20. Ali Si-Mohammed
    21. Josiane Chuisseu
    22. Richard Stevens
    23. Pantelis Constantoulakis
    24. Michela Sali
    25. Gilbert Greub
    26. Carsten Tiemann
    27. Vicent Pelechano
    28. Adrian Willig
    29. Zhenyu Xu

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  5. High throughput detection and genetic epidemiology of SARS-CoV-2 using COVIDSeq next-generation sequencing

    1. Rahul C. Bhoyar
    2. Abhinav Jain
    3. Paras Sehgal
    4. Mohit Kumar Divakar
    5. Disha Sharma
    6. Mohamed Imran
    7. Bani Jolly
    8. Gyan Ranjan
    9. Mercy Rophina
    10. Sumit Sharma
    11. Sanjay Siwach
    12. Kavita Pandhare
    13. Swayamprabha Sahoo
    14. Maheswata Sahoo
    15. Ananya Nayak
    16. Jatindra Nath Mohanty
    17. Jayashankar Das
    18. Sudhir Bhandari
    19. Sandeep K. Mathur
    20. Anshul Kumar
    21. Rahul Sahlot
    22. Pallavali Rojarani
    23. Juturu Vijaya Lakshmi
    24. Avileli Surekha
    25. Pulala Chandra Sekhar
    26. Shelly Mahajan
    27. Shet Masih
    28. Pawan Singh
    29. Vipin Kumar
    30. Blessy Jose
    31. Vidur Mahajan
    32. Vivek Gupta
    33. Rakesh Gupta
    34. Prabhakar Arumugam
    35. Anjali Singh
    36. Ananya Nandy
    37. Ragavendran P. V.
    38. Rakesh Mohan Jha
    39. Anupama Kumari
    40. Sheetal Gandotra
    41. Vivek Rao
    42. Mohammed Faruq
    43. Sanjeev Kumar
    44. Betsy Reshma G.
    45. Narendra Varma G.
    46. Shuvra Shekhar Roy
    47. Antara Sengupta
    48. Sabyasachi Chattopadhyay
    49. Khushboo Singhal
    50. Shalini Pradhan
    51. Diksha Jha
    52. Salwa Naushin
    53. Saruchi Wadhwa
    54. Nishu Tyagi
    55. Mukta Poojary
    56. Vinod Scaria
    57. Sridhar Sivasubbu

    Reviewed by ScreenIT

    2 evaluationsAppears in 1 listLatest version Latest activity

  6. SARS-CoV-2 genome analysis of strains in Pakistan reveals GH, S and L clade strains at the start of the pandemic

    1. Najia Karim Ghanchi
    2. Kiran Iqbal Masood
    3. Asghar Nasir
    4. Waqasuddin Khan
    5. Syed Hani Abidi
    6. Saba Shahid
    7. Syed Faisal Mahmood
    8. Akbar Kanji
    9. Safina Razzak
    10. Zeeshan Ansar
    11. Nazneen Islam
    12. M. B. Dharejo
    13. Zahra Hasan
    14. Rumina Hasan

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  7. Transcriptional Differences for COVID-19 Disease Map Genes between Males and Females Indicate a Different Basal Immunophenotype Relevant to the Disease

    1. Tianyuan Liu
    2. Leandro Balzano-Nogueira
    3. Ana Lleo
    4. Ana Conesa

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  8. A-to-I RNA editing in SARS-COV-2: real or artifact?

    1. Ernesto Picardi
    2. Luigi Mansi
    3. Graziano Pesole

    Reviewed by ScreenIT

    3 evaluationsAppears in 1 listLatest version Latest activity

  9. Distinct Patterns of Emergence of SARS-CoV-2 Spike Variants including N501Y in Clinical Samples in Columbus Ohio

    1. Huolin Tu
    2. Matthew R Avenarius
    3. Laura Kubatko
    4. Matthew Hunt
    5. Xiaokang Pan
    6. Peng Ru
    7. Jason Garee
    8. Keelie Thomas
    9. Peter Mohler
    10. Preeti Pancholi
    11. Dan Jones

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  10. IFN-γ and TNF-α drive a CXCL10+ CCL2+ macrophage phenotype expanded in severe COVID-19 lungs and inflammatory diseases with tissue inflammation

    1. Accelerating Medicines Partnership Rheumatoid Arthritis and Systemic Lupus Erythematosus (AMP RA/SLE) Consortium
    2. Fan Zhang
    3. Joseph R. Mears
    4. Lorien Shakib
    5. Jessica I. Beynor
    6. Sara Shanaj
    7. Ilya Korsunsky
    8. Aparna Nathan
    9. Laura T. Donlin
    10. Soumya Raychaudhuri

    Reviewed by ScreenIT

    2 evaluationsAppears in 1 listLatest version Latest activity
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