Genomics

  1. Introductions and early spread of SARS-CoV-2 in France

    1. Fabiana Gámbaro
    2. Sylvie Behillil
    3. Artem Baidaliuk
    4. Flora Donati
    5. Mélanie Albert
    6. Andreea Alexandru
    7. Maud Vanpeene
    8. Méline Bizard
    9. Angela Brisebarre
    10. Marion Barbet
    11. Fawzi Derrar
    12. Sylvie van der Werf
    13. Vincent Enouf
    14. Etienne Simon-Loriere

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  2. Broad Host Range of SARS-CoV-2 Predicted by Comparative and Structural Analysis of ACE2 in Vertebrates

    1. Joana Damas
    2. Graham M. Hughes
    3. Kathleen C. Keough
    4. Corrie A. Painter
    5. Nicole S. Persky
    6. Marco Corbo
    7. Michael Hiller
    8. Klaus-Peter Koepfli
    9. Andreas R. Pfenning
    10. Huabin Zhao
    11. Diane P. Genereux
    12. Ross Swofford
    13. Katherine S. Pollard
    14. Oliver A. Ryder
    15. Martin T. Nweeia
    16. Kerstin Lindblad-Toh
    17. Emma C. Teeling
    18. Elinor K. Karlsson
    19. Harris A. Lewin

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  3. Single-cell analysis of human lung epithelia reveals concomitant expression of the SARS-CoV-2 receptor ACE2 with multiple virus receptors and scavengers in alveolar type II cells

    1. Guangchun Han
    2. Ansam Sinjab
    3. Warapen Treekitkarnmongkol
    4. Patrick Brennan
    5. Kieko Hara
    6. Kyle Chang
    7. Elena Bogatenkova
    8. Beatriz Sanchez-Espiridion
    9. Carmen Behrens
    10. Boning Gao
    11. Luc Girard
    12. Jianjun Zhang
    13. Boris Sepesi
    14. Tina Cascone
    15. Lauren Byers
    16. Don L. Gibbons
    17. Jichao Chen
    18. Seyed Javad Moghaddam
    19. Edwin J. Ostrin
    20. Junya Fujimoto
    21. Jerry Shay
    22. John V. Heymach
    23. John D. Minna
    24. Steven Dubinett
    25. Paul A. Scheet
    26. Ignacio I. Wistuba
    27. Edward Hill
    28. Shannon Telesco
    29. Christopher Stevenson
    30. Avrum E. Spira
    31. Linghua Wang
    32. Humam Kadara

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  4. A transcription regulatory network within the ACE2 locus may promote a pro-viral environment for SARS-CoV-2 by modulating expression of host factors

    1. Tayaza Fadason
    2. Sreemol Gokuladhas
    3. Evgeniia Golovina
    4. Daniel Ho
    5. Sophie Farrow
    6. Denis Nyaga
    7. Hong Pan
    8. Neerja Karnani
    9. Conroy Wong
    10. Antony Cooper
    11. William Schierding
    12. Justin M. O’Sullivan

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  5. Genetic variability in the expression of the SARS-CoV-2 host cell entry factors across populations

    1. Lourdes Ortiz-Fernández
    2. Amr H Sawalha

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  6. Single Nucleus Multiomic Profiling Reveals Age-Dynamic Regulation of Host Genes Associated with SARS-CoV-2 Infection

    1. Allen Wang
    2. Joshua Chiou
    3. Olivier B Poirion
    4. Justin Buchanan
    5. Michael J Valdez
    6. Jamie M Verheyden
    7. Xiaomeng Hou
    8. Minzhe Guo
    9. Jacklyn M Newsome
    10. Parul Kudtarkar
    11. Dina A Faddah
    12. Kai Zhang
    13. Randee E Young
    14. Justinn Barr
    15. Ravi Misra
    16. Heidie Huyck
    17. Lisa Rogers
    18. Cory Poole
    19. Jeffery A. Whitsett
    20. Gloria Pryhuber
    21. Yan Xu
    22. Kyle J Gaulton
    23. Sebastian Preissl
    24. Xin Sun
    25. NHLBI LungMap Consortium

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  7. Type 2 and interferon inflammation strongly regulate SARS-CoV-2 related gene expression in the airway epithelium

    1. Satria P. Sajuthi
    2. Peter DeFord
    3. Nathan D. Jackson
    4. Michael T. Montgomery
    5. Jamie L. Everman
    6. Cydney L. Rios
    7. Elmar Pruesse
    8. James D. Nolin
    9. Elizabeth G. Plender
    10. Michael E. Wechsler
    11. Angel CY Mak
    12. Celeste Eng
    13. Sandra Salazar
    14. Vivian Medina
    15. Eric M. Wohlford
    16. Scott Huntsman
    17. Deborah A. Nickerson
    18. Soren Germer
    19. Michael C. Zody
    20. Gonçalo Abecasis
    21. Hyun Min Kang
    22. Kenneth M. Rice
    23. Rajesh Kumar
    24. Sam Oh
    25. Jose Rodriguez-Santana
    26. Esteban G. Burchard
    27. Max A. Seibold

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  8. Analysis of Infected Host Gene Expression Reveals Repurposed Drug Candidates and Time-Dependent Host Response Dynamics for COVID-19

    1. Jing Xing
    2. Rama Shankar
    3. Aleksandra Drelich
    4. Shreya Paithankar
    5. Evgenii Chekalin
    6. Thomas Dexheimer
    7. Mei-Sze Chua
    8. Surender Rajasekaran
    9. Chien-Te Kent Tseng
    10. Bin Chen

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  9. Genetic grouping of SARS-CoV-2 coronavirus sequences using informative subtype markers for pandemic spread visualization

    1. Zhengqiao Zhao
    2. Bahrad A. Sokhansanj
    3. Charvi Malhotra
    4. Kitty Zheng
    5. Gail L. Rosen

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  10. Single-cell analysis of severe COVID-19 patients reveals a monocyte-driven inflammatory storm attenuated by Tocilizumab

    1. Chuang Guo
    2. Bin Li
    3. Huan Ma
    4. Xiaofang Wang
    5. Pengfei Cai
    6. Qiaoni Yu
    7. Lin Zhu
    8. Liying Jin
    9. Chen Jiang
    10. Jingwen Fang
    11. Qian Liu
    12. Dandan Zong
    13. Wen Zhang
    14. Yichen Lu
    15. Kun Li
    16. Xuyuan Gao
    17. Binqing Fu
    18. Lianxin Liu
    19. Xiaoling Ma
    20. Jianping Weng
    21. Haiming Wei
    22. Tengchuan Jin
    23. Jun Lin
    24. Kun Qu

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