Bioinformatics

  1. SARS‐CoV‐2 B.1.617 Indian variants: Are electrostatic potential changes responsible for a higher transmission rate?

    1. Stefano Pascarella
    2. Massimo Ciccozzi
    3. Davide Zella
    4. Martina Bianchi
    5. Francesca Benedetti
    6. Domenico Benvenuto
    7. Francesco Broccolo
    8. Roberto Cauda
    9. Arnaldo Caruso
    10. Silvia Angeletti
    11. Marta Giovanetti
    12. Antonio Cassone

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  2. Predicted coronavirus Nsp5 protease cleavage sites in the human proteome

    1. Benjamin M. Scott
    2. Vincent Lacasse
    3. Ditte G. Blom
    4. Peter D. Tonner
    5. Nikolaj S. Blom

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  3. Evolutionary velocity with protein language models predicts evolutionary dynamics of diverse proteins

    1. Brian L. Hie
    2. Kevin K. Yang
    3. Peter S. Kim

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  4. In depth analysis of Cyprus-specific mutations of SARS-CoV-2 strains using computational approaches

    1. Anastasis Oulas
    2. Jan Richter
    3. Maria Zanti
    4. Marios Tomazou
    5. Kyriaki Michailidou
    6. Kyproula Christodoulou
    7. Christina Christodoulou
    8. George M. Spyrou

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  5. Single-cell longitudinal analysis of SARS-CoV-2 infection in human airway epithelium

    1. Neal G. Ravindra
    2. Mia Madel Alfajaro
    3. Victor Gasque
    4. Victoria Habet
    5. Jin Wei
    6. Renata B. Filler
    7. Nicholas C. Huston
    8. Han Wan
    9. Klara Szigeti-Buck
    10. Bao Wang
    11. Guilin Wang
    12. Ruth R. Montgomery
    13. Stephanie C. Eisenbarth
    14. Adam Williams
    15. Anna Marie Pyle
    16. Akiko Iwasaki
    17. Tamas L. Horvath
    18. Ellen F. Foxman
    19. Richard W. Pierce
    20. David van Dijk
    21. Craig B. Wilen

    Reviewed by ScreenIT, preLights

    2 evaluationsAppears in 2 listsLatest version Latest activity

  6. COVID-19 mortality is associated with pre-existing impaired innate immunity in health conditions

    1. Matthew Lee
    2. Yung Chang
    3. Navid Ahmadinejad
    4. Crista Johnson-Agbakwu
    5. Celeste Bailey
    6. Li Liu

    Reviewed by PeerJ, ScreenIT

    5 evaluationsAppears in 2 listsLatest version Latest activity

  7. Computational decomposition reveals reshaping of the SARS‐CoV‐2–ACE2 interface among viral variants expressing the N501Y mutation

    1. Eileen Socher
    2. Marcus Conrad
    3. Lukas Heger
    4. Friedrich Paulsen
    5. Heinrich Sticht
    6. Friederike Zunke
    7. Philipp Arnold

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  8. A new method to study genome mutations using the information entropy

    1. Melvin M. Vopson
    2. Samuel C. Robson

    Reviewed by ScreenIT

    1 evaluationAppears in 1 listLatest version Latest activity

  9. An issue of concern: unique truncated ORF8 protein variants of SARS-CoV-2

    1. Sk. Sarif Hassan
    2. Vaishnavi Kodakandla
    3. Elrashdy M. Redwan
    4. Kenneth Lundstrom
    5. Pabitra Pal Choudhury
    6. Tarek Mohamed Abd El-Aziz
    7. Kazuo Takayama
    8. Ramesh Kandimalla
    9. Amos Lal
    10. Ángel Serrano-Aroca
    11. Gajendra Kumar Azad
    12. Alaa A.A. Aljabali
    13. Giorgio Palù
    14. Gaurav Chauhan
    15. Parise Adadi
    16. Murtaza Tambuwala
    17. Adam M. Brufsky
    18. Wagner Baetas-da-Cruz
    19. Debmalya Barh
    20. Vasco Azevedo
    21. Nikolas G. Bazan
    22. Bruno Silva Andrade
    23. Raner José Santana Silva
    24. Vladimir N. Uversky

    Reviewed by PeerJ, ScreenIT

    5 evaluationsAppears in 2 listsLatest version Latest activity

  10. Novel ACE2 protein interactions relevant to COVID-19 predicted by evolutionary rate correlations

    1. Austin A. Varela
    2. Sammy Cheng
    3. John H. Werren

    Reviewed by PeerJ, ScreenIT

    5 evaluationsAppears in 2 listsLatest version Latest activity
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