1. Automated analysis of small RNA datasets with RAPID

    This article has 3 authors:
    1. Sivarajan Karunanithi
    2. Martin Simon
    3. Marcel H. Schulz

    Reviewed by PeerJ

    This article has 3 evaluationsAppears in 1 listLatest version Latest activity
  2. Iroki: automatic customization and visualization of phylogenetic trees

    This article has 5 authors:
    1. Ryan M. Moore
    2. Amelia O. Harrison
    3. Sean M. McAllister
    4. Shawn W. Polson
    5. K. Eric Wommack

    Reviewed by PeerJ

    This article has 2 evaluationsAppears in 1 listLatest version Latest activity
  3. fluff: exploratory analysis and visualization of high-throughput sequencing data

    This article has 2 authors:
    1. Georgios Georgiou
    2. Simon J. van Heeringen

    Reviewed by PeerJ

    This article has 2 evaluationsAppears in 1 listLatest version Latest activity
  4. Phylogenetic factorization of compositional data

    This article has 8 authors:
    1. Alex D Washburne
    2. Justin D Silverman
    3. Jonathan W Leff
    4. Dominic J Bennett
    5. John L. Darcy
    6. Sayan Mukherjee
    7. Noah Fierer
    8. Lawrence A David

    Reviewed by PeerJ

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
  5. The Oyster River Protocol: A Multi Assembler and Kmer Approach For de novo Transcriptome Assembly

    This article has 1 author:
    1. Matthew D. MacManes

    Reviewed by PeerJ

    This article has 5 evaluationsAppears in 1 listLatest version Latest activity
  6. Fast Virome Explorer: A Pipeline for Virus and Phage Identification and Abundance Profiling in Metagenomics Data

    This article has 3 authors:
    1. Saima Sultana Tithi
    2. Roderick V. Jensen
    3. Liqing Zhang

    Reviewed by PeerJ

    This article has 2 evaluationsAppears in 1 listLatest version Latest activity
  7. Comparative analyses of toxin-associated gene homologs from an Old World viper, Daboia russelii

    This article has 2 authors:
    1. Neeraja M. Krishnan
    2. Binay Panda

    Reviewed by PeerJ

    This article has 2 evaluationsAppears in 1 listLatest version Latest activity
  8. BLAST-based validation of metagenomic sequence assignments

    This article has 4 authors:
    1. Adam L. Bazinet
    2. Brian D. Ondov
    3. Daniel D. Sommer
    4. Shashikala Ratnayake

    Reviewed by PeerJ

    This article has 3 evaluationsAppears in 1 listLatest version Latest activity
  9. FUSTr: a tool to find gene Families Under Selection in Transcriptomes

    This article has 2 authors:
    1. T. Jeffrey Cole
    2. Michael S. Brewer

    Reviewed by PeerJ

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
  10. A robust statistical framework for reconstructing genomes from metagenomic data

    This article has 4 authors:
    1. Dongwan D. Kang
    2. Jeff Froula
    3. Rob Egan
    4. Zhong Wang

    Reviewed by PeerJ

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
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