Bioinformatics

GISA: using Gauss Integrals to identify rare conformations in protein structures

This article has 3 authors:
1. Christian Grønbæk
2. Thomas Hamelryck
3. Peter Røgen
Reviewed by PeerJ

This article has 5 evaluationsAppears in 1 listLatest version Jun 11, 2020Latest activity Jun 11, 2020
Deconvolute individual genomes from metagenome sequences through short read clustering

This article has 6 authors:
1. Kexue Li
2. Yakang Lu
3. Li Deng
4. Lili Wang
5. Lizhen Shi
6. Zhong Wang
Reviewed by PeerJ

This article has 5 evaluationsAppears in 1 listLatest version Apr 8, 2020Latest activity Apr 8, 2020
Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager

This article has 9 authors:
1. James A. Fellows Yates
2. Thiseas C. Lamnidis
3. Maxime Borry
4. Aida Andrades Valtueña
5. Zandra Fagernäs
6. Stephen Clayton
7. Maxime U. Garcia
8. Judith Neukamm
9. Alexander Peltzer
Reviewed by PeerJ

This article has 3 evaluationsAppears in 1 listLatest version Mar 16, 2021Latest activity Mar 16, 2021
Network based multifactorial modelling of miRNA-target interactions

This article has 2 authors:
1. Selcen Ari Yuka
2. Alper Yilmaz
Reviewed by PeerJ

This article has 3 evaluationsAppears in 1 listLatest version Mar 19, 2021Latest activity Mar 19, 2021
In silico candidate variant and gene identification using inbred mouse strains

This article has 5 authors:
1. Matthias Munz
2. Mohammad Khodaygani
3. Zouhair Aherrahrou
4. Hauke Busch
5. Inken Wohlers
Reviewed by PeerJ

This article has 4 evaluationsAppears in 1 listLatest version Mar 11, 2021Latest activity Mar 11, 2021
BingleSeq: a user-friendly R package for bulk and single-cell RNA-Seq data analysis

This article has 2 authors:
1. Daniel Dimitrov
2. Quan Gu
Reviewed by PeerJ

This article has 1 evaluationAppears in 1 listLatest version Dec 22, 2020Latest activity Dec 22, 2020
pmparser and PMDB: resources for large-scale, open studies of the biomedical literature

This article has 2 authors:
1. Joshua L. Schoenbachler
2. Jacob J. Hughey
Reviewed by PeerJ

This article has 3 evaluationsAppears in 1 listLatest version Mar 11, 2021Latest activity Mar 11, 2021
Digital Cell Sorter (DCS): a cell type identification, anomaly detection, and Hopfield landscapes toolkit for single-cell transcriptomics

This article has 5 authors:
1. Sergii Domanskyi
2. Alex Hakansson
3. Thomas J. Bertus
4. Giovanni Paternostro
5. Carlo Piermarocchi
Reviewed by PeerJ

This article has 3 evaluationsAppears in 1 listLatest version Jan 13, 2021Latest activity Jan 13, 2021
Macrel: antimicrobial peptide screening in genomes and metagenomes

This article has 4 authors:
1. Célio Dias Santos-Júnior
2. Shaojun Pan
3. Xing-Ming Zhao
4. Luis Pedro Coelho
Reviewed by PeerJ

This article has 4 evaluationsAppears in 1 listLatest version Dec 18, 2020Latest activity Dec 18, 2020
BiSCoT: improving large eukaryotic genome assemblies with optical maps

This article has 3 authors:
1. Benjamin Istace
2. Caroline Belser
3. Jean-Marc Aury
Reviewed by PeerJ

This article has 4 evaluationsAppears in 1 listLatest version Nov 5, 2020Latest activity Nov 5, 2020

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