termal: A Fast and Interactive Terminal-Based Viewer for Multiple Sequence Alignments

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Abstract

We present termal, a fast, interactive terminal-based viewer for multiple se- quence alignments (MSAs), designed for use on remote systems such as high-performance computing (HPC) clusters. Unlike traditional graphical viewers, termal runs entirely within a terminal and offers features such as scrolling, zooming, consensus/conservation visualization, and customizable colour schemes. It is implemented in Rust, ensuring high performance and minimal dependencies.

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