Global and local mutations in Bangladeshi SARS-CoV-2 genomes
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SciScore for 10.1101/2020.08.25.267658: (What is this?)
Please note, not all rigor criteria are appropriate for all manuscripts.
Table 1: Rigor
Institutional Review Board Statement not detected. Randomization not detected. Blinding not detected. Power Analysis not detected. Sex as a biological variable not detected. Table 2: Resources
Software and Algorithms Sentences Resources From these downloaded sequences, a custom python script was used to retrieve unique sequences. pythonsuggested: (IPython, RRID:SCR_001658)All selected sequences were aligned using MUSCLE software tool [16]. MUSCLEsuggested: (MUSCLE, RRID:SCR_011812)For correlation, we used one-way analysis of variance using SPSS Statistics 25 (IBM, Armonk, New York) licensed to King’s College London. SPSSsuggested: (SPSS, RRID:SCR_002865)Results from OddPub: We did not detect open data. We also did …
SciScore for 10.1101/2020.08.25.267658: (What is this?)
Please note, not all rigor criteria are appropriate for all manuscripts.
Table 1: Rigor
Institutional Review Board Statement not detected. Randomization not detected. Blinding not detected. Power Analysis not detected. Sex as a biological variable not detected. Table 2: Resources
Software and Algorithms Sentences Resources From these downloaded sequences, a custom python script was used to retrieve unique sequences. pythonsuggested: (IPython, RRID:SCR_001658)All selected sequences were aligned using MUSCLE software tool [16]. MUSCLEsuggested: (MUSCLE, RRID:SCR_011812)For correlation, we used one-way analysis of variance using SPSS Statistics 25 (IBM, Armonk, New York) licensed to King’s College London. SPSSsuggested: (SPSS, RRID:SCR_002865)Results from OddPub: We did not detect open data. We also did not detect open code. Researchers are encouraged to share open data when possible (see Nature blog).
Results from LimitationRecognizer: An explicit section about the limitations of the techniques employed in this study was not found. We encourage authors to address study limitations.Results from TrialIdentifier: No clinical trial numbers were referenced.
Results from Barzooka: We did not find any issues relating to the usage of bar graphs.
Results from JetFighter: We did not find any issues relating to colormaps.
Results from rtransparent:- Thank you for including a conflict of interest statement. Authors are encouraged to include this statement when submitting to a journal.
- No funding statement was detected.
- No protocol registration statement was detected.
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