KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response
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SciScore for 10.1101/2020.08.17.254839: (What is this?)
Please note, not all rigor criteria are appropriate for all manuscripts.
Table 1: Rigor
NIH rigor criteria are not applicable to paper type.Table 2: Resources
Software and Algorithms Sentences Resources Embeddings and t-SNE plot for knowledge graph visualization: We generated embeddings from our KG using Embiggen31, our Python library for graph embedding and machine learning, using node2vec with a skip-gram model, 128 embedding dimensions, and parameters p and q of 1 (which are typically used default parameters for node2vec)32. Pythonsuggested: (IPython, RRID:SCR_001658)Results from OddPub: Thank you for sharing your code and data.
Results from LimitationRecognizer: An explicit section about the limitations of the techniques employed in this study was not found. We encourage authors to …SciScore for 10.1101/2020.08.17.254839: (What is this?)
Please note, not all rigor criteria are appropriate for all manuscripts.
Table 1: Rigor
NIH rigor criteria are not applicable to paper type.Table 2: Resources
Software and Algorithms Sentences Resources Embeddings and t-SNE plot for knowledge graph visualization: We generated embeddings from our KG using Embiggen31, our Python library for graph embedding and machine learning, using node2vec with a skip-gram model, 128 embedding dimensions, and parameters p and q of 1 (which are typically used default parameters for node2vec)32. Pythonsuggested: (IPython, RRID:SCR_001658)Results from OddPub: Thank you for sharing your code and data.
Results from LimitationRecognizer: An explicit section about the limitations of the techniques employed in this study was not found. We encourage authors to address study limitations.Results from TrialIdentifier: No clinical trial numbers were referenced.
Results from Barzooka: We did not find any issues relating to the usage of bar graphs.
Results from JetFighter: We did not find any issues relating to colormaps.
Results from rtransparent:- Thank you for including a conflict of interest statement. Authors are encouraged to include this statement when submitting to a journal.
- Thank you for including a funding statement. Authors are encouraged to include this statement when submitting to a journal.
- No protocol registration statement was detected.
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