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  1. Chromosomal-level genome assembly of the long-spined sea urchin Diadema setosum (Leske, 1778)

    This article has 22 authors:
    1. Hong Kong Biodiversity Genomics Consortium
    2. Project Coordinator and Co-Principal Investigators
    3. Jerome H.L. Hui
    4. Ting Fung Chan
    5. Leo L. Chan
    6. Siu Gin Cheung
    7. Chi Chiu Cheang
    8. James K.H. Fang
    9. Juan D. Gaitan-Espitia
    10. Stanley C.K. Lau
    11. Yik Hei Sung
    12. Chris K.C. Wong
    13. Kevin Y.L. Yip
    14. Yingying Wei
    15. DNA extraction, library preparation and sequencing
    16. Wai Lok So
    17. Genome assembly and gene model prediction
    18. Wenyan Nong
    19. Sample collector, animal culture and logistics
    20. Apple P.Y. Chui
    21. Thomas H.W. Fong
    22. Ho Yin Yip
    This article has been curated by 1 group:
    • Curated by GigaByte

      Editors Assessment:

      This work is part of a series of papers from the Hong Kong Biodiversity Genomics Consortium sequencing the rich biodiversity of species in Hong Kong. This example assembles the genome of the long-spined sea urchin Diadema setosum (Leske, 1778). Using PacBio HiFi long-reads and Omni-C data the assembled genome size was 886 Mb, consistent to the size of other sea urchin genomes. The assembly anchored to 22 pseudo-molecules/chromosomes, and a total of 27,478 genes including 23,030 protein-coding genes were annotated. Peer review added more to the conclusion and future perspectives. The data hopefully providing a valuable resource and foundation for a better understanding of the ecology and evolution of sea urchins.

      This evaluation refers to version 1 of the preprint

    Reviewed by GigaByte

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