Arcadia Science

Latest preprint reviews

1. Divergent organelle allocation in the evolution of sperm gigantism revealed from subcellular quantification of nematode sperm with electron microscopy

   This article has 2 authors:

   1. Rebecca Schalkowski
   2. Asher D Cutter

   Reviewed by Arcadia Science

2. A platform for lab management, note-keeping and automation

   This article has 3 authors:

   1. Aubin Fleiss
   2. Alexander S. Mishin
   3. Karen S. Sarkisyan

   Reviewed by Arcadia Science

3. De novo design of miniprotein agonists and antagonists targeting G protein-coupled receptors

   This article has 72 authors:

   1. Edin Muratspahić
   2. David Feldman
   3. David E. Kim
   4. Xiangli Qu
   5. Ana-Maria Bratovianu
   6. Paula Rivera-Sánchez
   7. Jan Hendrik Voss
   8. Emil P. T. Hertz
   9. Mads Jeppesen
   10. Federica Dimitri
   11. Kensuke Sakamoto
   12. Amrita Nallathambi
   13. Pia Peceli
   14. Jianjun Cao
   15. Brian P. Cary
   16. Matthew J. Belousoff
   17. Peter Keov
   18. Phuc N.H. Trinh
   19. Qingchao Chen
   20. Yue Ren
   21. Justyn Fine
   22. Sudha Mishra
   23. Annu Dalal
   24. Shachie Sinha
   25. Ramanuj Banerjee
   26. Manisankar Ganguly
   27. Karthik Varappalayam Karuppusamy
   28. Isaac Sappington
   29. Thomas Schlichthaerle
   30. Jason Z. Zhang
   31. Arvind Pillai
   32. Brian Coventry
   33. Ljubica Mihaljević
   34. Magnus Bauer
   35. Susana Vázquez Torres
   36. Amir Motmaen
   37. Gyu Rie Lee
   38. Long Tran
   39. Xinru Wang
   40. Inna Goreshnik
   41. Dionne K. Vafeados
   42. Justin E. Svendsen
   43. Parisa Hosseinzadeh
   44. Nicolai Lindegaard
   45. Matthäus Brandt
   46. Yann Waltenspühl
   47. Kristine Deibler
   48. Lukas Deweid
   49. Anja Bennett
   50. Jendrik Schöppe
   51. Tiantang Dong
   52. Xiaoli Yan
   53. Luke Oostdyk
   54. William Cao
   55. Lakshmi Anantharaman
   56. Johan J. Weisser
   57. Jesper Frank Bastlund
   58. Christoffer Bundgaard
   59. Ayodeji A. Asuni
   60. Justin G. English
   61. Lance Stewart
   62. Lauren Halloran
   63. Jamie B. Spangler
   64. André Lieber
   65. Arun K. Shukla
   66. Patrick M. Sexton
   67. Bryan L. Roth
   68. Brian E. Krumm
   69. Denise Wootten
   70. Christopher G. Tate
   71. Christoffer Norn
   72. David Baker

   Reviewed by Arcadia Science

4. Calpain cleaves the carboxyl terminus of TRPV1 and modulates receptor tachyphylaxis

   This article has 9 authors:

   1. Jinyan Jiang
   2. Xiaochen Wang
   3. Jing Yang
   4. Shuwen Gao
   5. Jixuan Xu
   6. Jiao Liu
   7. Yun Wang
   8. Ping Liang
   9. Ying Zhang

   Reviewed by Arcadia Science

5. From Likelihood to Fitness: Improving Variant Effect Prediction in Protein and Genome Language Models

   This article has 4 authors:

   1. Charles W. J. Pugh
   2. Paulina G. Nuñez-Valencia
   3. Mafalda Dias
   4. Jonathan Frazer

   Reviewed by Arcadia Science

6. RamanMAE: Masked Autoencoders Enable Efficient Molecular Imaging by Learning Biologically Meaningful Spectral Representations

   This article has 2 authors:

   1. Santosh Kumar Paidi
   2. Parul Maheshwari

   Reviewed by Arcadia Science

7. Reconstitution of actomyosin networks in cell-sized liposomes reveals distinct mechanical roles of cytoskeletal organization in membrane shape remodeling

   This article has 3 authors:

   1. Makito Miyazaki
   2. Fahmida Sultana Laboni
   3. Taeyoon Kim

   Reviewed by Arcadia Science

8. The Viral AlphaFold Database of monomers and homodimers reveals conserved protein folds in viruses of bacteria, archaea, and eukaryotes

   This article has 10 authors:

   1. Roni Odai
   2. Michèle Leemann
   3. Tamim Al-Murad
   4. Minhal Abdullah
   5. Lena Shyrokova
   6. Tanel Tenson
   7. Vasili Hauryliuk
   8. Janani Durairaj
   9. Joana Pereira
   10. Gemma C. Atkinson

   Reviewed by Arcadia Science

9. Bacterial Wastewater-Based Epidemiology Using Surface-Enhanced Raman Spectroscopy and Machine Learning

   This article has 7 authors:

   1. Liam K. Herndon
   2. Yirui Zhang
   3. Fareeha Safir
   4. Babatunde Ogunlade
   5. Halleh B. Balch
   6. Alexandria B. Boehm
   7. Jennifer A. Dionne

   Reviewed by Arcadia Science

10. Have protein-ligand cofolding methods moved beyond memorisation?

    This article has 5 authors:

    1. Peter Škrinjar
    2. Jérôme Eberhardt
    3. Gerardo Tauriello
    4. Torsten Schwede
    5. Janani Durairaj

    Reviewed by PREreview, Arcadia Science