1. Functional network motifs defined through integration of protein-protein and genetic interactions

    This article has 2 authors:
    1. Amruta Sahoo
    2. Sebastian Pechmann

    Reviewed by PeerJ

    This article has 5 evaluationsAppears in 1 listLatest version Latest activity
  2. DnoisE: distance denoising by entropy. An open-source parallelizable alternative for denoising sequence datasets

    This article has 4 authors:
    1. Adrià Antich
    2. Creu Palacín
    3. Xavier Turon
    4. Owen S. Wangensteen

    Reviewed by PeerJ

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
  3. Parallel power posterior analyses for fast computation of marginal likelihoods in phylogenetics

    This article has 3 authors:
    1. Sebastian Höhna
    2. Michael J. Landis
    3. John P. Huelsenbeck

    Reviewed by PeerJ

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
  4. Regulatory context drives conservation of glycine riboswitch aptamers

    This article has 3 authors:
    1. Matt Crum
    2. Nikhil Ram-Mohan
    3. Michelle M. Meyer

    Reviewed by preLights

    This article has 1 evaluationAppears in 1 listLatest version Latest activity
  5. Navigating the amino acid sequence space between functional proteins using a deep learning framework

    This article has 1 author:
    1. Tristan Bitard-Feildel

    Reviewed by PeerJ

    This article has 2 evaluationsAppears in 1 listLatest version Latest activity
  6. StrainFLAIR : strain-level profiling of metagenomic samples using variation graphs

    This article has 6 authors:
    1. Kévin Da Silva
    2. Nicolas Pons
    3. Magali Berland
    4. Florian Plaza Oñate
    5. Mathieu Almeida
    6. Pierre Peterlongo

    Reviewed by PeerJ

    This article has 4 evaluationsAppears in 1 listLatest version Latest activity
  7. Struo2: efficient metagenome profiling database construction for ever-expanding microbial genome datasets

    This article has 2 authors:
    1. Nicholas D. Youngblut
    2. Ruth E. Ley

    Reviewed by PeerJ

    This article has 2 evaluationsAppears in 1 listLatest version Latest activity
  8. Locating ligand binding sites in G-protein coupled receptors using combined information from docking and sequence conservation

    This article has 3 authors:
    1. Ashley Ryan Vidad
    2. Stephen Macaspac
    3. Ho Leung Ng

    Reviewed by PeerJ

    This article has 5 evaluationsAppears in 1 listLatest version Latest activity
  9. SC-JNMF: single-cell clustering integrating multiple quantification methods based on joint non-negative matrix factorization

    This article has 4 authors:
    1. Mikio Shiga
    2. Shigeto Seno
    3. Makoto Onizuka
    4. Hideo Matsuda

    Reviewed by PeerJ

    This article has 6 evaluationsAppears in 1 listLatest version Latest activity
  10. NGScloud2: optimized bioinformatic analysis using Amazon Web Services

    This article has 3 authors:
    1. Fernando Mora-Márquez
    2. José Luis Vázquez-Poletti
    3. Unai López de Heredia

    Reviewed by PeerJ

    This article has 5 evaluationsAppears in 1 listLatest version Latest activity
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