CTLA-4 checkpoint signalling modulates germinal centre dynamics and antibody avidity during Borrelia burgdorferi infection in mice

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Abstract

Borrelia burgdorferi , the causative agent of Lyme borreliosis, persists in mammalian hosts despite robust activation of innate and adaptive immunity. A hallmark of murine infection is the production of low-avidity antibodies, yet the immunological mechanisms underlying this defective humoral response remain poorly understood.

Here, we used single-cell RNA sequencing of draining lymph node cells from Borrelia-infected mice at days 7 and 14 post-infection, comparing transcriptional profiles with those from mice immunised with heat-killed Borrelia or with a potent germinal centre-inducing protein immunisation. Borrelia infection induced a rapid germinal centre response, however, light zone B cells displayed diminished expression of co-stimulatory and T-B cell interaction molecules while maintaining core germinal centre identity markers, suggesting impaired positive selection. T follicular helper cells upregulated multiple inhibitory checkpoint receptor genes, most prominently Ctla4, alongside an active germinal centre engagement programme. Foxp3⁺ regulatory T cells upregulated genes associated with follicular-homing and suppressive function, including those implicated in CTLA-4-mediated trans-endocytosis.

To test whether inhibitory signalling contributes to the impaired humoral response, infected mice were treated with anti-CTLA-4 blocking antibody. CTLA-4 blockade significantly increased plasma cell numbers and enhanced both the magnitude and avidity of Borrelia - specific IgG responses, including the induction of complement-fixing IgG2a. These findings reveal that CTLA-4-dependent inhibitory signalling contributes to defective antibody quality during Borrelia infection, identifying a mechanism by which dysregulated T cell responses may facilitate impaired humoral control of a persistent spirochaetal pathogen.

Authors summary

Borrelia burgdorferi , the bacteria that cause Lyme borreliosis, can persist in the body for long periods despite triggering a strong immune response. One puzzling feature of this infection is that the antibodies produced are often of poor quality and do not bind the bacteria effectively.

To investigate why, we examined individual immune cells in lymph nodes of Borrelia -infected mice and compared them with cells from mice that received non-living Borrelia or a vaccine- like immunisation known to generate strong antibody responses. Although Borrelia infection rapidly triggered the formation of structures that normally help the immune system refine and improve antibodies, key communication signals between immune cells were reduced. At the same time, both helper and regulatory T cells showed increased activity of molecular pathways that act as brakes on immune responses. One such brake, controlled by a molecule called CTLA-4, appeared particularly important. When we blocked CTLA-4 during infection, mice produced more antibody-secreting cells and generated antibodies that had improved functional properties.

Our findings identify a mechanism that limits antibody quality during Borrelia infection and help explain how the bacteria can evade effective immune control and persist in the host.

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  1. CTLA-4 checkpoint signalling modulates germinal centre dynamics and antibody avidity during Borrelia burgdorferi infection in mice. #SingleCell 🧪🧬🖥️ https://www.biorxiv.org/content/10.64898/2026.10.30.763258v1

  2. CTLA-4 checkpoint signalling modulates germinal centre dynamics and antibody avidity during Borrelia burgdorferi infection in mice. https://www.biorxiv.org/content/10.64898/2026.10.30.763258v1

  3. CTLA-4 checkpoint signalling modulates germinal centre dynamics and antibody avidity during Borrelia burgdorferi infection in mice. https://www.biorxiv.org/content/10.64898/2026.10.30.763258v1