SNCA triplication shapes neuronal extracellular vesicle biology and promotes microglial activation in patient-derived iPSC-based models of Parkinson’s disease

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Abstract

Extracellular vesicles (EVs) are emerging as key mediators of intercellular communication and potential biomarkers in Parkinson’s disease (PD), yet how disease-causing genetic alterations shape neuronal EV biology remains incompletely understood. Here, we used PD-patient iPSC-derived midbrain dopaminergic neurons (mDANs) harboring SNCA triplication (SNCA-4x), gene-corrected controls (SNCA-GC), and SNCA knockout (SNCA-KO) to investigate the impact of a-synuclein overexpression on neuronal-enriched EV (nEV) biology and neuron to microglia communication. SNCA-4x mDANs exhibited marked transcriptional alterations in pathways related to vesicle trafficking and extracellular matrix organization. Using an optimized isolation workflow, SNCA-4x neurons released significantly more and smaller nEVs enriched in a-synuclein, mitochondrial DNA (mtDNA), and PARK7/DJ-1 mRNA, while displaying reduced acetylcholinesterase activity. Functionally, SNCA-4x-derived nEVs were taken up more efficiently by isogenic control iPSC-derived microglia than SNCA-GC nEVs and induced stronger pro-inflammatory activation than both SNCA-GC nEVs and untreated microglia, characterized by altered microglial morphology and increased TNF-a and IL-1p, consistent with damage-associated molecular pattern (DAMP)-mediated signaling. Together, these findings demonstrate that SNCA-4x reshapes the properties and molecular cargo of nEVs, enhancing their capacity to trigger microglial activation, and identify EV-associated a-synuclein, mtDNA, and PARK7 mRNA as candidate mechanistic and biomarker features in PD.

SNCA triplication reshapes neuronal-enriched extracellular vesicle biology: compared with isogenic gene-corrected neurons, iPSC-derived SNCA-4x dopaminergic neurons released more and smaller nEVs carrying elevated levels of a-synuclein and mitochondrial DNA compared to the SNCA-GC dopaminergic neurons. These nEVs were taken up more efficiently by SNCA-GC iPSC-derived microglia and triggered pro-inflammatory activation, with increased levels of TNF-a and IL-1p compared to the SNCA-GC nEVs.

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