Peptonella octanoica gen. nov., sp. nov., a new medium-chain carboxylate-producing bacterium, and the reclassification of Eubacterium pyruvativorans as Peptonella pyruvativorans comb. nov

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Abstract

A strictly anaerobic bacterial strain, F2 T , was isolated from an anaerobic bioreactor fermenting source-separated organic waste. Cells of strain F2 T are non-spore-forming, rod-shaped (1.5–2.5 × 0.27–0.33 µm), and Gram-negative, although they possess a monoderm cell wall architecture. The strain grew at 37 °C within a pH range of 5 to 8 and produced short-, branched-, and medium-chain carboxylates as well as ammonium, H 2 and CO 2 , with acetate and propanoate produced or consumed depending on fermentation conditions. The genome consists of a single 2.4 Mbp chromosome with a G+C content of 50.2% and 2,131 predicted genes. Phylogenetic analysis of the 16S rRNA gene against other isolates revealed that strain F2 T is most similar to Eubacterium pyruvativorans I-6 T (92.06% 16S rRNA identity). Based on further phenotypic, genomic, and phylogenetic analysis, strain F2 T represents a novel genus and species within the family Anaerovoracaceae with the proposed name Peptonella octanoica gen. nov. sp. nov. The type strain is F2 T (strain accession pending). As a member of this same genus-level clade, we propose reclassifying Eubacterium pyruvativorans as Peptonella pyruvativorans comb. nov. These findings disambiguate Peptonella spp. from the phylogenetically distant and phenotypically distinct Eubacterium limosum ATCC 8486 T .

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