Nocturnal cough as a syndromic surveillance signal for respiratory illness in England

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Abstract

We evaluated aggregated, privacy-preserving smartphone-detected nocturnal cough activity from the Sleep Cycle application as a potential syndromic surveillance signal in England. Weekly cough metrics from January 2023 to January 2026 were compared with UK Health Security Agency indicators: NHS 111 acute respiratory infection (ARI) triage calls, influenza and COVID-19 PCR positivity, and hospital admission rates for influenza, COVID-19, and respiratory syncytial virus. We evaluated total cough counts alongside two population-normalised metrics, coughs per user and coughs per hour of sleep, and assessed temporal relationships nationally and regionally using cross-correlation with prewhitening. The strongest and most consistent associations were observed for NHS 111 ARI triage calls, where population-normalised cough metrics showed raw national correlations of approximately 0.95 and retained prewhitened correlations above 0.55 at lag 0. This indicates that nocturnal cough activity closely tracks short-term variation in an established syndromic surveillance indicator, beyond shared seasonality, long-term trends, and autocorrelation. Similar near-contemporaneous patterns were observed across regions. Population-normalised cough metrics also showed epidemiologically plausible leading associations with pathogen-specific indicators: coughs per hour of sleep peaked one week before influenza PCR positivity, while both coughs per user and coughs per hour of sleep peaked one week before COVID-19 PCR positivity. Hospital-based indicators showed weaker and more heterogeneous relationships, but the normalised cough metrics still showed plausible temporal alignment with influenza and COVID-19 admissions, including contemporaneous associations with influenza admissions and short leading associations with COVID-19 admissions. In contrast, unnormalised total cough counts produced less stable and often non-interpretable lag structures, consistent with sensitivity to variation in observation volume. These findings suggest that passive, near-real-time nocturnal cough monitoring can provide a population-level signal of respiratory symptom burden, with greatest utility as a broad syndromic indicator that complements surveillance sources affected by healthcare-seeking behaviour, laboratory turnaround times, backfilling, and reporting delays.

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