Single-Molecule Dwell Times in Biomolecular Condensates

Biomolecular condensates are dynamic, membrane-free compartments that continuously exchange molecules with their surroundings. The dwell time, defined as the time a molecule remains inside a condensate between entry and exit, determines how extensively the molecule can explore the dense phase and encounter potential binding partners or reaction sites, thereby modulating condensate function. Motivated by our single-molecule measurements of RNA dwell times, we developed an analytical theory to understand dwell-time distributions in biomolecular condensates. Our theory predicts that the dwell-time distributions generally exhibit an early-time power-law regime followed by a late-time exponential tail. The form of the distribution encodes the rate-limiting mechanism of molecular escape: dense-phase diffusion-limited transport feature a −1.5 power law with an exponential tail set by a diffusion timescale, whereas interfacial barrier-crossing-limited transport feature a − 0.5 power law with a decay governed by a barrier-crossing timescale. These distinct signatures provide a direct readout of the physical processes that control molecular retention in condensates, with implications for both natural and synthetic condensates.