Inferring absolute cell proliferation and death rates from non-longitudinal single-cell transcriptomics

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Abstract

Cell proliferation and death rates are central to tissue biology but measuring them in vivo remains a persistent challenge. Here we present tissue dynamics inference (TIDYI), which quantifies absolute cell proliferation and death rates from non-longitudinal single-cell RNAseq snapshots. TIDYI expands the capability of single-cell RNAseq to extracting the cell dynamics of healthy and pathological tissues in vivo.

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