Arthrobacter rhizophilus sp. nov., an organic phosphate solubilizing bacterium isolated from rhizosphere soil of Meconopsis integrifolia

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Abstract

A Gram-staining-positive, rod-shaped, non-motile bacterium, designated strain MI7-26 T , with organic phosphate solubilizing ability was isolated from rhizosphere soil of Meconopsis integrifolia , Nyingchi, Xizang, China. Optimal growth conditions were observed at 30 ℃, pH 7.0 and 0.5% (w/v) NaCl. A comparative analysis of 16S rRNA gene sequences revealed that strain MI7-26 T showed the highest similarity to Arthrobacter bambusae GM18 T (98.6% sequence similarity); Arthrobacter gyeryongensis DCY72 T (98.5%); Pseudarthrobacter enclensis NIO-1008 T (97.5%). The genome size was 4.81 Mb and the G + C content was 63.1 mol%. Whole genome-based analysis revealed that MI7-26 T is more closely related to Arthrobacter ramosus , Arthrobacter gyeryongensis , and Arthrobacter bambusae , with both the Average Nucleotide Identity (ANI) and digital DNA-DNA hybridization (dDDH) values below the thresholds used for species delineation (ANI < 90%, dDDH < 40%). The major fatty acids were anteiso-C 15:0 and anteiso-C 17:0 . The predominant polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, two unidentified phospholipids, one unidentified aminolipid and two unidentified glycolipids. The major quinone was menaquinone MK-9(H 2 ). The cell-wall peptidoglycan was A3 α type, containing lysine and alanine. Phenotypically, strain MI7-26 T differed from its close relatives by being positive for the Voges-Proskauer reaction, methyl red test, and hydrolysis of Tween 80, as well as for enzyme activities of β-glucuronidase and N-acetyl-β-glucosaminidase. On the basis of phenotypic, phylogenetic and genotypic data, strain MI7-26 T is considered to represent a novel species of the genus Arthrobacter , for which the name Arthrobacter rhizophilus sp. nov. is proposed. The type strain is MI7-26 T (= GDMCC 1.3254 T  = JCM 35693 T ).

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