Construction and validation of risk models of prognostic genes associated with parthanatos in papillary thyroid carcinoma based on bioinformatics

Read the full article See related articles

Listed in

This article is not in any list yet, why not save it to one of your lists.
Log in to save this article

Abstract

Object: This study aimed to elucidate the role of parthanatos-related genes (PRGs) in papillary thyroid carcinoma (PTC) and construct a prognostic risk model to guide personalized treatment. Methods Using the GSE33630 dataset, differentially expressed PRGs were identified and analyzed via weighted gene co-expression network analysis (WGCNA) to pinpoint key module genes. Regression analysis selected seven prognostic genes for risk model construction. The model’s performance was validated, and a nomogram was developed for survival prediction. Further analyses included clinical feature correlations, immune infiltration, drug sensitivity, gene set enrichment analysis (GSEA), and experimental validation via RT-qPCR. Results Seven prognostic genes (TSHZ3, SERGEF, AKAP12, SGPP2, ASGR1, AK1, PELI2) were identified. The risk model demonstrated robust predictive accuracy, stratifying patients into high- and low-risk groups with significant survival differences. GSEA revealed 29 enriched pathways (e.g., ribosome, focal adhesion), while immune infiltration analysis highlighted CD56 + NK cells and AK1 as key immune correlates. Drug sensitivity screening identified 111 differential therapeutics. Functional analysis indicated AKAP12 had the strongest functional similarity among prognostic genes. Conclusion This study comprehensively mapped PRGs in PTC, established a validated risk model, and provided insights into immune-microenvironment interactions and therapeutic targets, advancing precision oncology for PTC.

Article activity feed