Integrative SMR and multi-model machine learning characterize FCER1A- and INSIG1-associated phenotypes in arterial aging-related disease

Read the full article

Listed in

This article is not in any list yet, why not save it to one of your lists.
Log in to save this article

Abstract

Background and aims : Global population aging has made age-related cardiovascular disease an urgent public health challenge, and inflammation is closely associated with arterial aging. This study aimed to identify inflammation-related molecular features associated with arterial aging-related disease using an integrative analytical framework. Methods : We integrated summary-data-based Mendelian randomization (SMR), machine learning, single-cell RNA sequencing, and weighted gene co-expression network analysis. SMR used FinnGen coronary artery disease GWAS and GTEx v8 whole-blood eQTL data. Models were evaluated in GEO transcriptomic datasets; single-cell and macrophage-state analyses resolved cell-type expression patterns. Expression was assessed in serially passaged human umbilical vein endothelial cells and naturally aged C57BL/6J mice. Drug-response prediction, docking, and molecular dynamics simulations prioritized candidate compounds and assessed modeled interactions. Results : FCER1A and INSIG1 were preferentially expressed in macrophage populations and varied across connected macrophage states and inferred trajectories in diseased vessels. Their expression was also increased during serial-passage-associated endothelial senescence and in aged mouse arterial tissue. Computational analyses prioritized dihydrorotenone and entospletinib and supported plausible modeled interactions with the corresponding protein structures. Conclusions : The integrative analysis prioritized FCER1A and INSIG1 as molecular features associated with arterial aging-related disease and provided cell-type localization and experimental expression evidence. These results set the stage for follow-up mechanistic and pharmacological investigations to dissect causal relationships and explore their therapeutic relevance.

Article activity feed