A lymph node–targeted Amphiphile vaccine induces potent cellular and humoral immunity to SARS-CoV-2

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Abstract

Lymph node–targeting adjuvant AMP-CpG enhances SARS-CoV-2 RBD vaccine-induced cellular and humoral immune responses.

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  1. SciScore for 10.1101/2020.08.17.251728: (What is this?)

    Please note, not all rigor criteria are appropriate for all manuscripts.

    Table 1: Rigor

    Institutional Review Board StatementIACUC: All animal studies were carried out under an institute-approved IACUC protocol following federal, state, and local guidelines for the care and use of animals.
    RandomizationAnimals were not randomized for any of the studies, and dosing was not blinded.
    BlindingAnimals were not randomized for any of the studies, and dosing was not blinded.
    Power Analysisnot detected.
    Sex as a biological variableAnimals: Female, 6 to 8-week-old C57BL/6J and BALB/c mice and 37-week-old C57BL/6J mice were purchased from Jackson Laboratory (Bar Harbor, ME).
    Cell Line Authenticationnot detected.

    Table 2: Resources

    Antibodies
    SentencesResources
    Antigen-Binding ELISA: ELISAs were performed to determine sera antibody binding titers.
    Antigen-Binding ELISA
    suggested: (Ling-Chu Hung / Animal Health Research Institute, Council of Agriculture, Executive Yuan, Taiwan Cat# 12-Hung-03 m& 20 ORF3 7D3, RRID:AB_2827541)
    Plates were washed 4 times with washing buffer (BioLegend; Cat: 4211601) and then incubated for 1 h at RT with a 1:2000 dilution of secondary antibody of horse radish peroxidase (HRP)-conjugated rabbit anti-mouse IgM (μ chain),
    anti-mouse IgM ( μ chain) ,
    suggested: None
    Briefly, bead populations with distinct fluorescence intensities that are coated with capture antibodies specific for various cytokines including IFNγ, TNFα, IL-4, IL-6, IL-10, and IL-17 were incubated with culture supernatants.
    TNFα
    suggested: None
    IL-4
    suggested: None
    IL-6
    suggested: None
    IL-10
    suggested: None
    Cells were stained with the following antibodies: PE anti-mouse IFNγ (BD, Cat:
    anti-mouse IFNγ
    suggested: None
    Experimental Models: Cell Lines
    SentencesResources
    Control wells included ACE2-HEK293 cells or control HEK293 cells with the virus, but no sera, and provided the maximum transduction level and the background, respectively.
    HEK293
    suggested: CLS Cat# 300192/p777_HEK293, RRID:CVCL_0045)
    Pseudovirus neutralization data for the pilot experiment was performed by GenScript (Nanjing, China) following the same protocol, but using in-house ACE2-HEK293 cells and Spike RBD-HRP recombinant protein.
    ACE2-HEK293
    suggested: None
    Experimental Models: Organisms/Strains
    SentencesResources
    Animals: Female, 6 to 8-week-old C57BL/6J and BALB/c mice and 37-week-old C57BL/6J mice were purchased from Jackson Laboratory (Bar Harbor, ME).
    C57BL/6J
    suggested: None
    BALB/c
    suggested: None
    Software and Algorithms
    SentencesResources
    Mean fluorescent intensities (MFI) were calculated using FACSDiva software (BD) and protein concentrations were extrapolated using Microsoft Excel.
    FACSDiva
    suggested: (BD FACSDiva Software, RRID:SCR_001456)
    Microsoft Excel
    suggested: (Microsoft Excel, RRID:SCR_016137)
    Sample acquisition was performed on FACSCanto II (BD) and data analyzed with FlowJo V10 software (TreeStar).
    FlowJo
    suggested: (FlowJo, RRID:SCR_008520)
    Cell pellets were re-suspended in 3 mL of ACK lysis buffer (Quality Biological, Inc., Cat: 118156101) for 5 min on ice; then PBS was added to stop the reaction.
    Quality Biological
    suggested: None
    Statistics: All data were plotted and all statistical analyses were performed using GraphPad Prism 8 software (La Jolla, CA).
    GraphPad Prism
    suggested: (GraphPad Prism, RRID:SCR_002798)

    Results from OddPub: We did not detect open data. We also did not detect open code. Researchers are encouraged to share open data when possible (see Nature blog).


    Results from LimitationRecognizer: An explicit section about the limitations of the techniques employed in this study was not found. We encourage authors to address study limitations.

    Results from TrialIdentifier: No clinical trial numbers were referenced.


    Results from Barzooka: We did not find any issues relating to the usage of bar graphs.


    Results from JetFighter: Please consider improving the rainbow (“jet”) colormap(s) used on pages 27 and 28. At least one figure is not accessible to readers with colorblindness and/or is not true to the data, i.e. not perceptually uniform.


    Results from rtransparent:
    • Thank you for including a conflict of interest statement. Authors are encouraged to include this statement when submitting to a journal.
    • No funding statement was detected.
    • No protocol registration statement was detected.

    About SciScore

    SciScore is an automated tool that is designed to assist expert reviewers by finding and presenting formulaic information scattered throughout a paper in a standard, easy to digest format. SciScore checks for the presence and correctness of RRIDs (research resource identifiers), and for rigor criteria such as sex and investigator blinding. For details on the theoretical underpinning of rigor criteria and the tools shown here, including references cited, please follow this link.