Atlas of cardiomyopathy associated DES (desmin) mutations: Functional insights into the critical 1B domain
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Background
Desmin is a muscle-specific intermediate filament protein crucial for maintaining cardiomyocyte structural integrity connecting multi-protein complexes and organelles. While DES mutations are known to cause various (cardio)myopathies, many rare variants remain classified as variants of uncertain significance (VUS).
Methods
We generated expression plasmids for 93 VUS located in the 1B domain and assessed filament formation in multiple cell lines, including cardiomyocytes derived from induced pluripotent stem cells. Filament assembly of purified wild-type and mutant desmin was analyzed using atomic force microscopy (AFM). Sequencing of 399 patients with severe dilated cardiomyopathy (DCM) identified the DES-p.L187P variant in one individual. Desmin localization in explanted myocardial tissue from this patient was examined via immunohistochemistry (IHC).
Results
Four variants (p.L159P, p.R163P, p.L187P, and p.E197del) caused filament formation defects, disrupting assembly even when co-expressed with wild-type desmin—consistent with dominant inheritance. AFM revealed that these mutations impaired filament formation, resulting in small desmin complexes, while wild-type desmin formed regular filaments. Systematic proline substitutions across the 1B domain showed that insertions at hydrophobic a- and d-sites disrupted filament assembly, whereas others had minimal impact. IHC confirmed desmin disorganization in myocardial tissue from a DES- p.L187P mutation carrier with DCM.
Conclusion
The atlas of cardiomyopathy-associated desmin mutations represents a significant step toward improving the clinical interpretation of DES variants associated with cardiomyopathies. Our data provide robust evidence, that four variants of previously unknown significance listed in the ClinVar database warrant reclassification as ‘likely pathogenic’ mutations based on their molecular effects. Specifically, we demonstrated that proline insertions – particularly at positions where hydrophobic amino acids contribute to the intermolecular interactions between alpha helices – lead to desmin filament assembly defects. These findings not only enhance our understanding of desmin-related cardiomyopathies but also offer a valuable resource for cardiologists and genetic counselors in guiding diagnosis, risk stratification and patient counseling.
