TipA, a Bdellovibrio bacteriovorus BPI-like double-TULIP is opened by its adapter protein, TipB

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Abstract

Bdellovibrio bacteriovorus is a predatory bacterium that invades the periplasm of other Gram-negative bacteria and liberates prey biomolecules for replication. Bdellovibrio has a wealth of genes that encode unique proteins to enable this lifestyle. Using a series of x-ray structures, we show that the operonal pairing of bd2538 and bd2539, encode a double T ULIP (tubular lipid binding protein) invasion p rotein A (TipA) and a small beta sandwich (TipB), respectively. TipA has a specialised N-terminal TULIP domain with a beta hairpin and helix that mediate homodimerisation through hairpin interdigitation. This dimerisation creates a large, continuous, enclosed lumen that we demonstrate to contain multiple lipid molecules. In addition, we show that TipB functions as a small adapter protein that binds to TipA using specialised loops that bury into the TipA hydrophobic core. This binding forms a clamp on the edge of the N-terminal beta sheet and induces a large 20 Å conformational change, opening the TULIP fold to create an accessible interior. This study presents the first structural characterisation of lipid binding proteins in Bdellovibrio , and the first example of conformational change in TULIPs mediated by an adaptor protein.

Synopsis

Bdellovibrio bacteriovorus is a predatory bacterium that invades the periplasm of other Gram-negative bacteria in order to consume them from within. To enable this lifestyle, it has an arsenal of predation-associated genes, including the operonal pair bd2538 and bd2539 . We use structural and biophysical techniques to characterise two proteins produced by these genes, TipA and TipB.

  • TipA is a double tubular lipid binding protein (TULIP) that forms a homodimer that sequesters lipids in its lumen and binds to lipid bilayers

  • TipB is a small beta sandwich that interacts with TipA via two specialised loops

  • Interaction of TipA with TipB opens the TULIP fold of TipA

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