Local collective memory from ratiometric signaling outperforms cellular gradient sensing limits

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Abstract

Cells excel at interpreting noisy chemical gradients during fertilization, development, and immune responses, but the mechanisms underlying this remarkable ability remain poorly understood. Classical models for gradient sensing assume that information is derived solely from ligand-bound receptors, but cells can also utilize information from unbound receptors. Here, we first derive the physical limit for instantaneous gradient detection by a distribution of receptors on a sphere. Surprisingly, we find that a ratiometric biochemical strategy, which compares spatial distributions of active (bound) and inactive (unbound) receptors, can surpass this physical limit. Using theory and simulations, we show this enhancement stems from a local collective memory encoded by downstream proteins that average receptor states sampled over time. Such memory-driven averaging allows cells to reliably interpret gradient direction despite receptor scarcity or noisy conditions, demonstrating how ratiometric sensing mechanisms could broadly enhance cellular responses to directional cues from the environment.

Significance Statement

Cells detect chemical gradients using receptors on their surface to guide essential processes like fertilization, immune responses, and organismal development. However, chemical environments are often noisy and complex, and it remains unclear how cells can accurately interpret these signals. We show that by using information from inactive as well as active receptors, a cell can average each receptor’s state over time and store that information in a population of downstream signaling proteins near the receptor. This strategy improves gradient sensing accuracy even when receptors are scarce or gradients are noisy, offering a path to improved engineering of microscale biosensors or drug-delivery devices that can orient in complex chemical landscapes.

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