SVelfie: A method for discovering cancer drivers based on enrichment of likely functional structural variants
Listed in
This article is not in any list yet, why not save it to one of your lists.Abstract
Structural variants (SVs) can drive tumorigenesis, yet discovering SV cancer drivers remains challenging 1 . Here, we present SVelfie ( S tructural V ariants e nriched with l ikely f unctional/ i mpactful e vents), a statistical method to infer driver genes from SVs detected across a cohort of cancer genomes, based on enrichment of likely functional events. When testing SVelfie on lymphoma samples from the Pan-Cancer Analysis of Whole Genomes (PCAWG) 2 , it corroborates known tumor suppressor genes and also yields novel driver candidates.