Global Pan-cancer serum miRNA classifier across 13 cancer types: Analysis of 46,349 clinical samples

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Abstract

Liquid biopsy offers the minimally-invasive way of early cancer diagnosis. MicroRNAs (miRNAs) are small non-coding RNAs that show promising diagnostic potential due to their stability and their dysregulation upon different physiological conditions. However, existing cancer classifiers often rely on cohort-based comparisons, limiting their clinical utility. Extensive analyses in this study present a pan-cancer miRNA-based single-sample classifier, trained on 16,190 samples, tested across 9 independent datasets, and further validated on 8 distinct disease cohorts. The classifier leverages miRNA expression signatures to classify cancer and non_cancer samples including healthy, other diseases with high sensitivity and specificity, enabling personalized predictions. The classifier identifies cancer by evaluating the relative expression patterns of specific miRNAs, capturing neoplasm-specific dysregulation patterns independent of cohort effects. This study highlights the potential of miRNAs in robust cancer classification, offering a minimally invasive, scalable, and clinically adaptable miRNA serum resource for early cancer detection across diverse populations and malignancies.

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