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  1. SciScore for 10.1101/2022.05.24.22275398: (What is this?)

    Please note, not all rigor criteria are appropriate for all manuscripts.

    Table 1: Rigor

    NIH rigor criteria are not applicable to paper type.

    Table 2: Resources

    No key resources detected.

    Results from OddPub: We did not detect open data. We also did not detect open code. Researchers are encouraged to share open data when possible (see Nature blog).

    Results from LimitationRecognizer: We detected the following sentences addressing limitations in the study:
    Study limitations: While our study provides insight into the variability and natural history of long COVID, there are limitations that should be considered. While the U09.9 code provides a simple inclusion criterion, its application in health systems across the country is not uniform and may differ from one data partner to another. Also, since the use of the code began only recently, patients with long COVID that were diagnosed prior to the introduction of the code are not included, limiting our ability to compare the current clinical manifestations with those observed earlier in the pandemic before widespread vaccination and with different distributions of SARS-CoV2 strains and variants. However, in a pilot study in Denmark, coding with U09.9 was found to have a positive predictive value of 94% for long COVID.56 Our ability to capture clinical manifestations of long COVID is limited by the accessibility of clinical data in EHR systems. Of the 287 HPO terms we identified as being used in published cohort studies on long COVID,19 only 116 were identified in our data. The reasons for this presumably include unstructured data such as symptoms and radiological findings that are not well represented in the OMOP data that is the source of our data. Examples include Gaze-evoked nystagmus (HP:0000640), Pericardial effusion (HP:0001698), and Exercise intolerance (HP:0003546) that are typically diagnosed using specialist examinations or medical history that may not be easily coded in s...

    Results from TrialIdentifier: No clinical trial numbers were referenced.

    Results from Barzooka: We did not find any issues relating to the usage of bar graphs.

    Results from JetFighter: We did not find any issues relating to colormaps.

    Results from rtransparent:
    • Thank you for including a conflict of interest statement. Authors are encouraged to include this statement when submitting to a journal.
    • Thank you for including a funding statement. Authors are encouraged to include this statement when submitting to a journal.
    • No protocol registration statement was detected.

    Results from scite Reference Check: We found no unreliable references.

    About SciScore

    SciScore is an automated tool that is designed to assist expert reviewers by finding and presenting formulaic information scattered throughout a paper in a standard, easy to digest format. SciScore checks for the presence and correctness of RRIDs (research resource identifiers), and for rigor criteria such as sex and investigator blinding. For details on the theoretical underpinning of rigor criteria and the tools shown here, including references cited, please follow this link.

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