Revealing the Threat of Emerging SARS-CoV-2 Mutations to Antibody Therapies
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SciScore for 10.1101/2021.04.12.439473: (What is this?)
Please note, not all rigor criteria are appropriate for all manuscripts.
Table 1: Rigor
NIH rigor criteria are not applicable to paper type.Table 2: Resources
Antibodies Sentences Resources Additionally, a bipartition graph is introduced to describe the antibody and antigen in PPIs. antigen in PPIs.suggested: NoneExperimental Models: Organisms/Strains Sentences Resources The SKEMPI 2.0 is an updated version of the SKEMPI database, which contains new mutations and data from other three databases: AB-Bind [39], PROXiMATE [40], and dbMPIKT [41]. AB-Bindsuggested: NoneSoftware and Algorithms Sentences Resources We take the first complete SARS-CoV-2 genome from the GenBank (NC_045512.2) as the reference genome [35], and the multiple sequence alignment is applied by the Clustal Omega [36, 37] with … SciScore for 10.1101/2021.04.12.439473: (What is this?)
Please note, not all rigor criteria are appropriate for all manuscripts.
Table 1: Rigor
NIH rigor criteria are not applicable to paper type.Table 2: Resources
Antibodies Sentences Resources Additionally, a bipartition graph is introduced to describe the antibody and antigen in PPIs. antigen in PPIs.suggested: NoneExperimental Models: Organisms/Strains Sentences Resources The SKEMPI 2.0 is an updated version of the SKEMPI database, which contains new mutations and data from other three databases: AB-Bind [39], PROXiMATE [40], and dbMPIKT [41]. AB-Bindsuggested: NoneSoftware and Algorithms Sentences Resources We take the first complete SARS-CoV-2 genome from the GenBank (NC_045512.2) as the reference genome [35], and the multiple sequence alignment is applied by the Clustal Omega [36, 37] with default parameters, which results in 27,530 single nucleotide polymorphism profiles. Clustal Omegasuggested: (Clustal Omega, RRID:SCR_001591)The implemented GBDT is a function from the scikit-learn package (version 0.22.2.post1) [49]. scikit-learnsuggested: (scikit-learn, RRID:SCR_002577)Results from OddPub: Thank you for sharing your data.
Results from LimitationRecognizer: An explicit section about the limitations of the techniques employed in this study was not found. We encourage authors to address study limitations.Results from TrialIdentifier: No clinical trial numbers were referenced.
Results from Barzooka: We did not find any issues relating to the usage of bar graphs.
Results from JetFighter: We did not find any issues relating to colormaps.
Results from rtransparent:- Thank you for including a conflict of interest statement. Authors are encouraged to include this statement when submitting to a journal.
- Thank you for including a funding statement. Authors are encouraged to include this statement when submitting to a journal.
- No protocol registration statement was detected.
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