Single cell RNA sequencing of 13 human tissues identify cell types and receptors of human coronaviruses
This article has been Reviewed by the following groups
Listed in
- Evaluated articles (ScreenIT)
Abstract
No abstract available
Article activity feed
-
SciScore for 10.1101/2020.02.16.951913: (What is this?)
Please note, not all rigor criteria are appropriate for all manuscripts.
Table 1: Rigor
NIH rigor criteria are not applicable to paper type.Table 2: Resources
Software and Algorithms Sentences Resources Data collection: The gene raw counts or normalized gene expression matrix for each single cell were downloaded from GEO (https://www.ncbi.nlm.nih.gov/geo/) or Human Cell Atlas (https://www.humancellatlas.org) database (Table S1). https://www.ncbi.nlm.nih.gov/geo/suggested: (Gene Expression Omnibus (GEO, RRID:SCR_005012)https://www.humancellatlas.orgsuggested: (Human Cell Atlas, RRID:SCR_016530)It was implemented by ‘‘FindVariableGenes’’ function in the Seurat package. Seuratsuggested: (SEURAT, RRID:SCR_007322)Cell-cell interaction analysis: We conducted cell-cell interaction analysis … SciScore for 10.1101/2020.02.16.951913: (What is this?)
Please note, not all rigor criteria are appropriate for all manuscripts.
Table 1: Rigor
NIH rigor criteria are not applicable to paper type.Table 2: Resources
Software and Algorithms Sentences Resources Data collection: The gene raw counts or normalized gene expression matrix for each single cell were downloaded from GEO (https://www.ncbi.nlm.nih.gov/geo/) or Human Cell Atlas (https://www.humancellatlas.org) database (Table S1). https://www.ncbi.nlm.nih.gov/geo/suggested: (Gene Expression Omnibus (GEO, RRID:SCR_005012)https://www.humancellatlas.orgsuggested: (Human Cell Atlas, RRID:SCR_016530)It was implemented by ‘‘FindVariableGenes’’ function in the Seurat package. Seuratsuggested: (SEURAT, RRID:SCR_007322)Cell-cell interaction analysis: We conducted cell-cell interaction analysis utilizing cellphonedb function curated by CellPhoneDB database[24]. CellPhoneDBsuggested: (CellPhoneDB, RRID:SCR_017054)Results from OddPub: Thank you for sharing your data.
Results from LimitationRecognizer: An explicit section about the limitations of the techniques employed in this study was not found. We encourage authors to address study limitations.Results from TrialIdentifier: No clinical trial numbers were referenced.
Results from Barzooka: We did not find any issues relating to the usage of bar graphs.
Results from JetFighter: We did not find any issues relating to colormaps.
Results from rtransparent:- Thank you for including a conflict of interest statement. Authors are encouraged to include this statement when submitting to a journal.
- No funding statement was detected.
- No protocol registration statement was detected.
-
-